Ilia Igashov
banner
igashov.bsky.social
Ilia Igashov
@igashov.bsky.social
PhD student at LPDI, EPFL 🇨🇭
AI & Structural Biology
That's true 😁 We have kernel density estimate plots and statistical tests in Appendix (Fig. 18 and 19)
March 13, 2025 at 12:51 PM
While DrugFlow is really good in distribution learning, we also show that it can be easily tuned to generate molecules with optimised target properties. For example, we can boost docking efficiency and synthetic accessibility, or reduce the level of swill in samples @wpwalters.bsky.social
March 11, 2025 at 3:02 PM
Our adaptive size mechanism allows DrugFlow to remove excessive atoms on the fly, adjusting the molecular size to the provided pocket constraints. In our experiments, we demonstrate that DrugFlow can avoid steric clashes if the provided molecular size is too big.
March 11, 2025 at 3:02 PM
DrugFlow's atom-level confidence score is able to detect unlikely samples and correlates with molecular size and docking efficiency. In particular, DrugFlow tends to assign low confidence in cases when it introduces steric clashes with the protein or produces strange geometries.
March 11, 2025 at 3:02 PM
(2/2) SynFlowNet: Design of Diverse and Novel Molecules with Synthesis Constraints openreview.net/forum?id=uvH...
SynFlowNet: Design of Diverse and Novel Molecules with Synthesis...
Generative models see increasing use in computer-aided drug design. However, while performing well at capturing distributions of molecular motifs, they often produce synthetically inaccessible...
openreview.net
January 23, 2025 at 11:19 AM