Estibaliz Gómez de Mariscal, PhD
@gomez-mariscal.bsky.social
Mathematician facing biomedical image processing challenges 💻🔬🧚♂️🦄
https://henriqueslab.org/pages/egdmariscal
@embo.bsky.social fellow at @henriqueslab.bsky.social @aiopticalbiolab.bsky.social
Former @arratemunoz.bsky.social @deniswirtz.bsky.social
https://henriqueslab.org/pages/egdmariscal
@embo.bsky.social fellow at @henriqueslab.bsky.social @aiopticalbiolab.bsky.social
Former @arratemunoz.bsky.social @deniswirtz.bsky.social
Pinned
Why do lower-resolution images sometimes yield better results in deep learning for bioimaging analyses? 🤔📉
Mariana Ferreira's new preprint on #ReScale4DL explores this paradox and introduces optimal resolution design! @gomez-mariscal.bsky.social brainchild🧑🔬✨
Check: www.biorxiv.org/content/10.1...
Mariana Ferreira's new preprint on #ReScale4DL explores this paradox and introduces optimal resolution design! @gomez-mariscal.bsky.social brainchild🧑🔬✨
Check: www.biorxiv.org/content/10.1...
🚨Alô #bsky and #microscopy community, we got #ReScale4DL, our new work in
@aiopticalbiolab.bsky.social
, out today!😍 🥳
We present the #imageresolutionparadox phenomenon for #DL-results 🤓
👇Check it out!!
@aiopticalbiolab.bsky.social
, out today!😍 🥳
We present the #imageresolutionparadox phenomenon for #DL-results 🤓
👇Check it out!!
Reposted by Estibaliz Gómez de Mariscal, PhD
Great news for @aiopticalbiolab.bsky.social! @henriqueslab.bsky.social has been awarded #HealthResearch grant from @caixaresearch.bsky.social.🎉
This milestone strengthens the pursue of our scientific objectives and represents an important step forward for the future of our lab.🔬 #laCaixaFoundation
This milestone strengthens the pursue of our scientific objectives and represents an important step forward for the future of our lab.🔬 #laCaixaFoundation
Light from high-res microscopes can damage cells and limit the study of viral infection cycles.
With a #HealthResearch grant, @henriqueslab.bsky.social (@itqbnova.bsky.social) uses AI to adjust light in real time and boost our understanding of infectious diseases.
https://tinyurl.com/3y8zwyes
With a #HealthResearch grant, @henriqueslab.bsky.social (@itqbnova.bsky.social) uses AI to adjust light in real time and boost our understanding of infectious diseases.
https://tinyurl.com/3y8zwyes
November 20, 2025 at 12:13 PM
Great news for @aiopticalbiolab.bsky.social! @henriqueslab.bsky.social has been awarded #HealthResearch grant from @caixaresearch.bsky.social.🎉
This milestone strengthens the pursue of our scientific objectives and represents an important step forward for the future of our lab.🔬 #laCaixaFoundation
This milestone strengthens the pursue of our scientific objectives and represents an important step forward for the future of our lab.🔬 #laCaixaFoundation
Reposted by Estibaliz Gómez de Mariscal, PhD
Extremely thankful to @caixaresearch.bsky.social for supporting our vision, and to all the amazing collaborators who enable our research. It takes a vilage and this is a road we walk together. Now onwards to make those scopes go pew pew only when needed
Light from high-res microscopes can damage cells and limit the study of viral infection cycles.
With a #HealthResearch grant, @henriqueslab.bsky.social (@itqbnova.bsky.social) uses AI to adjust light in real time and boost our understanding of infectious diseases.
https://tinyurl.com/3y8zwyes
With a #HealthResearch grant, @henriqueslab.bsky.social (@itqbnova.bsky.social) uses AI to adjust light in real time and boost our understanding of infectious diseases.
https://tinyurl.com/3y8zwyes
November 20, 2025 at 11:17 AM
Extremely thankful to @caixaresearch.bsky.social for supporting our vision, and to all the amazing collaborators who enable our research. It takes a vilage and this is a road we walk together. Now onwards to make those scopes go pew pew only when needed
Reposted by Estibaliz Gómez de Mariscal, PhD
🎉 Highlights from #SPAOM2025!
From cutting-edge sessions on #AI & Smart #Microscopy 🔬🤖 to our lightning-fast flash talks ⚡, today’s speakers shared brilliant ideas driving the future of imaging and discovery!
Huge thanks to all presenters for the inspiring insights and energy 🙌
From cutting-edge sessions on #AI & Smart #Microscopy 🔬🤖 to our lightning-fast flash talks ⚡, today’s speakers shared brilliant ideas driving the future of imaging and discovery!
Huge thanks to all presenters for the inspiring insights and energy 🙌
November 6, 2025 at 1:38 PM
🎉 Highlights from #SPAOM2025!
From cutting-edge sessions on #AI & Smart #Microscopy 🔬🤖 to our lightning-fast flash talks ⚡, today’s speakers shared brilliant ideas driving the future of imaging and discovery!
Huge thanks to all presenters for the inspiring insights and energy 🙌
From cutting-edge sessions on #AI & Smart #Microscopy 🔬🤖 to our lightning-fast flash talks ⚡, today’s speakers shared brilliant ideas driving the future of imaging and discovery!
Huge thanks to all presenters for the inspiring insights and energy 🙌
Reposted by Estibaliz Gómez de Mariscal, PhD
Thank you, @gomez-mariscal.bsky.social! 🫶
We’re thrilled to have you with us at @spaommeeting.bsky.social 2025 and glad to see you enjoying the workshops and sessions. Here’s to more inspiring discussions and discoveries ahead! 🔬🙌
We’re thrilled to have you with us at @spaommeeting.bsky.social 2025 and glad to see you enjoying the workshops and sessions. Here’s to more inspiring discussions and discoveries ahead! 🔬🙌
November 6, 2025 at 1:18 AM
Thank you, @gomez-mariscal.bsky.social! 🫶
We’re thrilled to have you with us at @spaommeeting.bsky.social 2025 and glad to see you enjoying the workshops and sessions. Here’s to more inspiring discussions and discoveries ahead! 🔬🙌
We’re thrilled to have you with us at @spaommeeting.bsky.social 2025 and glad to see you enjoying the workshops and sessions. Here’s to more inspiring discussions and discoveries ahead! 🔬🙌
@spaommeeting.bsky.social has started already 🌟 it's amazing seeing some colleagues again and feeling our vibrating local community 🤩 Day I started strong with neurosciences, AI, image quality assessment, pathology, live cell imaging and all the incredible workshops!
November 5, 2025 at 4:37 PM
@spaommeeting.bsky.social has started already 🌟 it's amazing seeing some colleagues again and feeling our vibrating local community 🤩 Day I started strong with neurosciences, AI, image quality assessment, pathology, live cell imaging and all the incredible workshops!
Reposted by Estibaliz Gómez de Mariscal, PhD
🚀🔬 Announcing #IMS2026 at @itqbnova.bsky.social! We're assembling a #LifeSciences #Microscopy symposium packed with ✨ speakers and 🧑🔬 workshops. All about imaging cells with photons, electrons and AI! If you love microscopy, you need to be here. Join us on March 19!
ims2026.itqbnovacommunity.org
ims2026.itqbnovacommunity.org
October 21, 2025 at 2:25 PM
🚀🔬 Announcing #IMS2026 at @itqbnova.bsky.social! We're assembling a #LifeSciences #Microscopy symposium packed with ✨ speakers and 🧑🔬 workshops. All about imaging cells with photons, electrons and AI! If you love microscopy, you need to be here. Join us on March 19!
ims2026.itqbnovacommunity.org
ims2026.itqbnovacommunity.org
Reposted by Estibaliz Gómez de Mariscal, PhD
🦠🔬🤖🧑💻 #mAIcrobe is out! With @pinholab.bsky.social's lab, we launched an open-source framework for high-throughput bacterial image analysis. By rockstars A. Brito & B. Saraiva et al, making #DeepLearning for phenotyping accessible! Easy to use, plus model training
📜 www.biorxiv.org/content/10.1...
📜 www.biorxiv.org/content/10.1...
October 22, 2025 at 11:10 AM
🦠🔬🤖🧑💻 #mAIcrobe is out! With @pinholab.bsky.social's lab, we launched an open-source framework for high-throughput bacterial image analysis. By rockstars A. Brito & B. Saraiva et al, making #DeepLearning for phenotyping accessible! Easy to use, plus model training
📜 www.biorxiv.org/content/10.1...
📜 www.biorxiv.org/content/10.1...
After a few days, I'm still amazed about the great work and absolutely admiring researchers gathered together🔥From developmental biology (even poisoning frogs🤯)parasitology&cell biology to open-source&accessible imaging ecosystems and mind-blowing education initiatives😍
October 20, 2025 at 1:31 PM
After a few days, I'm still amazed about the great work and absolutely admiring researchers gathered together🔥From developmental biology (even poisoning frogs🤯)parasitology&cell biology to open-source&accessible imaging ecosystems and mind-blowing education initiatives😍
Reposted by Estibaliz Gómez de Mariscal, PhD
Thank you to the organisers Constadina Arvanitis, @mariodelr.bsky.social, Helena De la Torre, @marianadeniz.bsky.social, María Fernanda Latorre Barragán and Licyel Lenny Paulas Condori.
Find out more about this week's Workshop: biologists.com/workshops/gl...
#BiologistsWorkshops
Find out more about this week's Workshop: biologists.com/workshops/gl...
#BiologistsWorkshops
October 16, 2025 at 12:33 PM
Thank you to the organisers Constadina Arvanitis, @mariodelr.bsky.social, Helena De la Torre, @marianadeniz.bsky.social, María Fernanda Latorre Barragán and Licyel Lenny Paulas Condori.
Find out more about this week's Workshop: biologists.com/workshops/gl...
#BiologistsWorkshops
Find out more about this week's Workshop: biologists.com/workshops/gl...
#BiologistsWorkshops
Reposted by Estibaliz Gómez de Mariscal, PhD
The 𝗘𝘂𝗿𝗼𝗽𝗲𝗮𝗻 𝗥𝗲𝘀𝗲𝗮𝗿𝗰𝗵𝗲𝗿𝘀’ 𝗡𝗶𝗴𝗵𝘁 𝗢𝗲𝗶𝗿𝗮𝘀 𝟮𝟬𝟮𝟱 was the last outreach event at our lab with @mariodelr.bsky.social, @gomez-mariscal.bsky.social, Daria Aristova and Damián Martínez.👩🔬👩💻
Having scientists from diverse fields showcasing the range of work being developed in our institute was truly inspiring🤩
Having scientists from diverse fields showcasing the range of work being developed in our institute was truly inspiring🤩
October 13, 2025 at 1:13 PM
The 𝗘𝘂𝗿𝗼𝗽𝗲𝗮𝗻 𝗥𝗲𝘀𝗲𝗮𝗿𝗰𝗵𝗲𝗿𝘀’ 𝗡𝗶𝗴𝗵𝘁 𝗢𝗲𝗶𝗿𝗮𝘀 𝟮𝟬𝟮𝟱 was the last outreach event at our lab with @mariodelr.bsky.social, @gomez-mariscal.bsky.social, Daria Aristova and Damián Martínez.👩🔬👩💻
Having scientists from diverse fields showcasing the range of work being developed in our institute was truly inspiring🤩
Having scientists from diverse fields showcasing the range of work being developed in our institute was truly inspiring🤩
#SMLMS2025 has been an absolute pleasure🤩Not to mention the joy of learning about the cool techniques+advances happening in this vibrant community, and meeting some references in the field🥹Thank you very much to the organisers+ #ySMLMS's for the opportunity and the warm,stimulating+energetic event🌟
Estibaliz Gomez de Marisca @gomez-mariscal.bsky.social from Lisbon going live and sharing great work on AI-empowered microscopy #SMLMS2025 and accessible AI
August 29, 2025 at 11:58 PM
#SMLMS2025 has been an absolute pleasure🤩Not to mention the joy of learning about the cool techniques+advances happening in this vibrant community, and meeting some references in the field🥹Thank you very much to the organisers+ #ySMLMS's for the opportunity and the warm,stimulating+energetic event🌟
Reposted by Estibaliz Gómez de Mariscal, PhD
Just out of the oven
onlinelibrary.wiley.com/doi/10.1111/...
I’m so excited! Stay tuned for more posts about it and give it a read when you can🥰
onlinelibrary.wiley.com/doi/10.1111/...
I’m so excited! Stay tuned for more posts about it and give it a read when you can🥰
August 29, 2025 at 8:11 PM
Just out of the oven
onlinelibrary.wiley.com/doi/10.1111/...
I’m so excited! Stay tuned for more posts about it and give it a read when you can🥰
onlinelibrary.wiley.com/doi/10.1111/...
I’m so excited! Stay tuned for more posts about it and give it a read when you can🥰
Reposted by Estibaliz Gómez de Mariscal, PhD
Great presentation of @gomez-mariscal.bsky.social. Covering PhotoFiTT, DL4MicEverywhere, resolution-matching and many other aspects of the FAIRy universe 💻🔬🧚♂️ #DeepLearning #Microscopy
Estibaliz Gomez de Marisca @gomez-mariscal.bsky.social from Lisbon going live and sharing great work on AI-empowered microscopy #SMLMS2025 and accessible AI
August 29, 2025 at 10:04 AM
Great presentation of @gomez-mariscal.bsky.social. Covering PhotoFiTT, DL4MicEverywhere, resolution-matching and many other aspects of the FAIRy universe 💻🔬🧚♂️ #DeepLearning #Microscopy
Reposted by Estibaliz Gómez de Mariscal, PhD
Estibaliz Gomez de Marisca @gomez-mariscal.bsky.social from Lisbon going live and sharing great work on AI-empowered microscopy #SMLMS2025 and accessible AI
August 29, 2025 at 7:51 AM
Estibaliz Gomez de Marisca @gomez-mariscal.bsky.social from Lisbon going live and sharing great work on AI-empowered microscopy #SMLMS2025 and accessible AI
Reposted by Estibaliz Gómez de Mariscal, PhD
Xavier Darzacq is our keynote speaker of today and takes us on an amazing journey through the cell nucleus with amazing single-molecule biology #SMLMS2025
www.tjian-darzacq.mcb.berkeley.edu
www.tjian-darzacq.mcb.berkeley.edu
August 27, 2025 at 3:32 PM
Xavier Darzacq is our keynote speaker of today and takes us on an amazing journey through the cell nucleus with amazing single-molecule biology #SMLMS2025
www.tjian-darzacq.mcb.berkeley.edu
www.tjian-darzacq.mcb.berkeley.edu
Reposted by Estibaliz Gómez de Mariscal, PhD
We are kicking off #SMLMS2025 and are happy to welcome you all in Bonn! @smlm-symposium.bsky.social www.smlms.org
August 27, 2025 at 11:06 AM
We are kicking off #SMLMS2025 and are happy to welcome you all in Bonn! @smlm-symposium.bsky.social www.smlms.org
Reposted by Estibaliz Gómez de Mariscal, PhD
Johannes Stein @jmstein.bsky.social from Harvard/Wyss reports impressive work on imaging the nuclear ultrastructure of cells using cryosections and DNA-PAINT #SMLMS2025
August 28, 2025 at 8:53 AM
Johannes Stein @jmstein.bsky.social from Harvard/Wyss reports impressive work on imaging the nuclear ultrastructure of cells using cryosections and DNA-PAINT #SMLMS2025
Reposted by Estibaliz Gómez de Mariscal, PhD
Johannes Hohlbein @hohlbeinlab.bsky.social from Wageningen presenting his great work on the dynamics of the E. coli replication initiator DnaA #SMLMS2025
August 28, 2025 at 8:16 AM
Johannes Hohlbein @hohlbeinlab.bsky.social from Wageningen presenting his great work on the dynamics of the E. coli replication initiator DnaA #SMLMS2025
Reposted by Estibaliz Gómez de Mariscal, PhD
We are so happy to have Zaida Luthey-Schulten here at #SMLMS2025 as a keynote speaker. Zaida is the Director of the NSF Science & Technology Center of Quantitative Cell Biology and Endowed Professor at UIUC. She pioneered 4D modelling of an entire cell integrating experimental data. So inspiring!
August 28, 2025 at 10:43 AM
We are so happy to have Zaida Luthey-Schulten here at #SMLMS2025 as a keynote speaker. Zaida is the Director of the NSF Science & Technology Center of Quantitative Cell Biology and Endowed Professor at UIUC. She pioneered 4D modelling of an entire cell integrating experimental data. So inspiring!
Reposted by Estibaliz Gómez de Mariscal, PhD
This year’s pre-event symposium #youngSMLMS brings together ECRs in single-molecule microscopy: smlms.org/young-smlms/
youngSMLMS – SMLMS 2025
smlms.org
July 30, 2025 at 3:29 PM
This year’s pre-event symposium #youngSMLMS brings together ECRs in single-molecule microscopy: smlms.org/young-smlms/
Reposted by Estibaliz Gómez de Mariscal, PhD
⌚It’s the last couple of days to register for #SMLMS2025.
Check out @gomez-mariscal.bsky.social's report on last year’s pre-symposium AI4Life Workshop & Hackathon: focalplane.biologists.com/2025/07/22/b...
🤫Results from collaborations seeded at the workshop will be presented at #SMLMS2025 🤫
Check out @gomez-mariscal.bsky.social's report on last year’s pre-symposium AI4Life Workshop & Hackathon: focalplane.biologists.com/2025/07/22/b...
🤫Results from collaborations seeded at the workshop will be presented at #SMLMS2025 🤫
Bridging AI and Super-Resolution Microscopy: Highlights from the AI4Life Workshop & Hackathon at SMLMS 2024 - FocalPlane
Bridging AI and Super-Resolution Microscopy: Highlights from the AI4Life Workshop & Hackathon at SMLMS 2024 -
focalplane.biologists.com
July 30, 2025 at 3:29 PM
⌚It’s the last couple of days to register for #SMLMS2025.
Check out @gomez-mariscal.bsky.social's report on last year’s pre-symposium AI4Life Workshop & Hackathon: focalplane.biologists.com/2025/07/22/b...
🤫Results from collaborations seeded at the workshop will be presented at #SMLMS2025 🤫
Check out @gomez-mariscal.bsky.social's report on last year’s pre-symposium AI4Life Workshop & Hackathon: focalplane.biologists.com/2025/07/22/b...
🤫Results from collaborations seeded at the workshop will be presented at #SMLMS2025 🤫
🚨Registration for @smlm-symposium.bsky.social is still open! If you're considering attending, this happened the year before at the pre-symposium with @ai4life.bsky.social 🌟 :
(spoiler: results from collaborations seeded there will be around at #SMLMS25👀🤩)
👉 focalplane.biologists.com/2025/07/22/b...
(spoiler: results from collaborations seeded there will be around at #SMLMS25👀🤩)
👉 focalplane.biologists.com/2025/07/22/b...
Bridging AI and Super-Resolution Microscopy: Highlights from the AI4Life Workshop & Hackathon at SMLMS 2024 - FocalPlane
Bridging AI and Super-Resolution Microscopy: Highlights from the AI4Life Workshop & Hackathon at SMLMS 2024 -
focalplane.biologists.com
July 24, 2025 at 10:16 AM
🚨Registration for @smlm-symposium.bsky.social is still open! If you're considering attending, this happened the year before at the pre-symposium with @ai4life.bsky.social 🌟 :
(spoiler: results from collaborations seeded there will be around at #SMLMS25👀🤩)
👉 focalplane.biologists.com/2025/07/22/b...
(spoiler: results from collaborations seeded there will be around at #SMLMS25👀🤩)
👉 focalplane.biologists.com/2025/07/22/b...
Reposted by Estibaliz Gómez de Mariscal, PhD
The 2nd AI4Life Challenge is live!
Calling the AI & bioimaging community to tackle a key microscopy challenge: removing noise while preserving detail.
📦 Paired noisy/clean datasets
📈 Ground-truth evaluation
🧠 DL focus
Build, test, compete 👉 ai4life.eurobioimaging.eu/challenge-2/
Calling the AI & bioimaging community to tackle a key microscopy challenge: removing noise while preserving detail.
📦 Paired noisy/clean datasets
📈 Ground-truth evaluation
🧠 DL focus
Build, test, compete 👉 ai4life.eurobioimaging.eu/challenge-2/
June 27, 2025 at 1:33 PM
The 2nd AI4Life Challenge is live!
Calling the AI & bioimaging community to tackle a key microscopy challenge: removing noise while preserving detail.
📦 Paired noisy/clean datasets
📈 Ground-truth evaluation
🧠 DL focus
Build, test, compete 👉 ai4life.eurobioimaging.eu/challenge-2/
Calling the AI & bioimaging community to tackle a key microscopy challenge: removing noise while preserving detail.
📦 Paired noisy/clean datasets
📈 Ground-truth evaluation
🧠 DL focus
Build, test, compete 👉 ai4life.eurobioimaging.eu/challenge-2/
Reposted by Estibaliz Gómez de Mariscal, PhD
🚨Join us! We're soon opening 3 postdoctoral positions in #AIDrivenBiology. Seeking biologists (especially microbiology and infection biology), computer scientists, and microscopy developers. Ideal candidates are those eager to use or develop next-gen tech for cell biology. Get in touch (DM/email)
July 10, 2025 at 8:34 AM
🚨Join us! We're soon opening 3 postdoctoral positions in #AIDrivenBiology. Seeking biologists (especially microbiology and infection biology), computer scientists, and microscopy developers. Ideal candidates are those eager to use or develop next-gen tech for cell biology. Get in touch (DM/email)