Gregor Diensthuber
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gdiensthuber.bsky.social
Gregor Diensthuber
@gdiensthuber.bsky.social
PhD student @NovoaLab @CRGenomica |Wet-Lab 🔁 Dry-Lab | RNA modifications | Method Development 🧬⚒
Reposted by Gregor Diensthuber
Latest #CDlab paper on nanopore protein sequencing on @biorxivpreprint.bsky.social: www.biorxiv.org/cgi/content/...

Here, Justas Ritmejeris, @xiuqichen.bsky.social, collaborator @albadalab.bsky.social and me developed a conjugation chemistry strategy for nanopore sequencing of natural peptides!
November 13, 2025 at 7:16 PM
Awesome place to do a PhD with exciting labs, a truly supportive PhD community, and the most scenic morning views you can imagine! 🌅

10/10
Are you looking for a PhD? Join us in Barcelona! You'll dive into a community of >100 PhD students from 30 countries exploring the frontiers of biology. You can also join an online workshop on 6 November (15:00 CET) to learn how to find the right lab for you.

More info: www.crg.eu/en/content/t...
October 23, 2025 at 9:34 AM
Reposted by Gregor Diensthuber
End-to-end protein design in the browser through evedesign. Generate and interactively explore designs in 2D/3D and export them as codon-optimized DNA. The underlying open source framework (released soon) is build to easily add new methods, more on that soon.
🌐 evedesign.bio
October 22, 2025 at 2:30 PM
Reposted by Gregor Diensthuber
Very excited to share our new paper on the influence of biological sex and smoking in the clonal landscape of normal human bladder, just published in Nature.
A big thank you and congrats to all the authors, specially to @raquelbmi.bsky.social for all the shared efforts in this journey!

⬇️More info⬇️
October 8, 2025 at 6:04 PM
Reposted by Gregor Diensthuber
Novoa Lab joined the PRBB Open Day 2025🔬🧬🌊 @prbb.org to share our passion for RNA research with the public. Thanks to everyone who came to explore science with us and thanks organisers for making this event possible! #PRBBOpenDay #OpenScience
October 6, 2025 at 6:07 PM
Reposted by Gregor Diensthuber
The goal of a PhD is not to learn some facts or read a few papers or learn a bunch of techniques. The goal of a PhD is to learn independence, problem solving, how to finish things you start, resilience, & gain the ability to adapt & think creatively. Learning these things is hard.
August 13, 2025 at 5:28 PM
Reposted by Gregor Diensthuber
Looks like private funders, HHMI,CZI etc., are not going to “save” US research. Europe is setting up mechanisms to attract US researchers & it may work. But, common, target junior talent, don’t shower money on superstars who will be flying professors & return to US when the science winter passes.
August 10, 2025 at 3:35 PM
Reposted by Gregor Diensthuber
RNA N-glycosylation enables immune evasion and homeostatic efferocytosis by chemically caging acp3U. Excited to report this work lead by Vinnie @vinnieviruses.bsky.social and in collaboration with @vijayrathinam.bsky.social in @nature.com www.nature.com/articles/s41...
August 6, 2025 at 3:36 PM
Reposted by Gregor Diensthuber
Systematic benchmarking of basecalling models for RNA modification detection with highly-multiplexed nanopore sequencing. #DirectRNAsequencing #DRS #RNAmodifications #Nanopore #Genomics #Bioinformatics #ModelBenchmarking #Basecalling @biorxivpreprint.bsky.social
www.biorxiv.org/content/10.1...
August 4, 2025 at 7:05 PM
🚨 New preprint alert 🚨
We systematically benchmarked @nanoporetech.com 's modification-aware basecalling models released for RNA on sets of in vitro and in vivo sequences and made some curious observations 🧬🔍.
bit.ly/4lXqNul
Follow along for a little recap (1/12)
Systematic benchmarking of basecalling models for RNA modification detection with highly multiplexed nanopore sequencing
Nanopore direct RNA sequencing (DRS) holds promise for advancing our understanding of the epitranscriptome by detecting RNA modifications in native RNA molecules. Recently, Oxford Nanopore Technologie...
bit.ly
July 14, 2025 at 4:00 PM
Reposted by Gregor Diensthuber
Another epic Novoa Lab retreat in the books!
A big thank you to everyone who made it such a success — from the science-packed discussions and hands-on workshops to the brainstorming, games, sunny pool sessions, and delicious BBQs. And special thanks to the organizers!⚘️
@evamarianovoa.bsky.social
July 11, 2025 at 4:39 PM
Reposted by Gregor Diensthuber
Reposted by Gregor Diensthuber
Endinsa’t en una vivència sensorial única que connecta ciència i art immersiu. “SEEING: Un ull i una caixa” arriba del 5 al 14 de juny al Centre Cívic Convent de Sant Agustí (Carrer del Comerç 36, Barcelona). www.crg.eu/en/event/see...
May 30, 2025 at 11:25 AM
Reposted by Gregor Diensthuber
### PhD position alert ###

Please repost!

I'm excited to announce a new *PhD position* within our group.

We are looking for a super-motivated candidate with a solid basis in wet- and dry-lab research. Apply now & make sure to include all docs!

werkenbijprinsesmaximacentrum.nl/en/vacancy/p...
PhD Position: Unraveling the Dark Proteome in Pediatric Cancer - Werken bij Prinses Maxima Centrum
Background For decades, vast stretches of the genome were dismissed as non-functional ‘junk’. However, our group and others have revealed that these regions harbor numerous non-canonical open reading ...
werkenbijprinsesmaximacentrum.nl
May 16, 2025 at 9:04 AM
Reposted by Gregor Diensthuber
Check it out - amazing new work by @raflynn5.bsky.social and Kostas Tzelepis labs, discovery of a cell surface RNA/glycoRNA binding protein that is also a cancer antigen, new target for antibody therapy!

www.nature.com/articles/s41...
Treatment of acute myeloid leukemia models by targeting a cell surface RNA-binding protein - Nature Biotechnology
An RNA-binding protein on leukemia cells provides an effective target in mouse models.
www.nature.com
April 25, 2025 at 5:19 AM
How has native RNA sequencing contributed to epitranscriptomic research? This is one of the main questions we addressed in our recent review by @evamarianovoa.bsky.social and I now live in Molecular Cell #RNAsky #RNA #nanopore
authors.elsevier.com/a/1kS2f3vVUP...
January 20, 2025 at 4:07 PM
Elegant work from the labmate #IvanMilenkovic showing that 'epitranscriptomic fingerprints' of highly modified rRNAs can classify tissues / dev. stages / cell types and even health/disease status! #notstatic
www.cell.com/molecular-ce...
Epitranscriptomic rRNA fingerprinting reveals tissue-of-origin and tumor-specific signatures
Milenkovic et al. demonstrate that rRNA modifications are differentially modified across tissues, developmental stages, and in disease. The authors show that rRNA modification patterns, also termed “epitranscriptomic rRNA fingerprints,” are sufficient to accurately identify tissue of origin and tumorigenicity, from as few as 250 reads.
www.cell.com
December 11, 2024 at 10:18 AM
Reposted by Gregor Diensthuber