Dina Schneidman
dinaschneidman.bsky.social
Dina Schneidman
@dinaschneidman.bsky.social
Computational Structural Biology, The Hebrew University of Jerusalem
6/ RaCoon performs multicalibration of ESM1b, producing reliable probabilities across all relevant subgroups using minimal supervision.
December 1, 2025 at 10:35 AM
5/ This motivated RaCoon (Residue-aware calibration via conditional distributions).
(It calibrates like a raccoon sorts trash: by categories. 😉)
December 1, 2025 at 10:35 AM
4/ Surprisingly calibrating per variant subgroup (i.e. interface) not only improves miscalibration but also increase global AUROC across most models.
December 1, 2025 at 10:35 AM
3/ We calibrate VEPs at the residue level since variant effects depend strongly on local residue properties. We find that model entropy distribution can guide calibration.
December 1, 2025 at 10:35 AM
2/ In a calibrated model a model score of 0.8 means ~80% of similar variants are pathogenic. But VEPs often fail, especially for variants in disordered regions or protein-protein interfaces.
December 1, 2025 at 10:35 AM