Thank you very much to the UShER team (Jakob McBroome, @angieshinrichs.bsky.social, @russcd.bsky.social, Yatish Turakhia, and many more) for providing the daily-updated trees, @theo.io for developing Taxonium (and adding several features upon request!) and CDC AMD for funding. 4/4

The feature is only available on open.cov-spectrum.org which uses data from INSDC (GenBank/ENA/DDBJ), we unfortunately cannot provide it for data from GISAID.

If you have any questions or suggestions, please let us know! 3/4

You can choose to only display the sequences of the variant or the whole MRCA clade and color the tips by different metadata fields. You can also click on an inner node and search for a subtree. 2/4

“Loculus is remarkable for enabling efficient and secure sharing of pathogen genomic data, which is crucial for public health responses to infectious diseases."
🥁That’s what the committee said about this #SIBRemarkableOutputs 2024
👉Discover the output: tinyurl.com/53arz2rz

🤔Interested in building and managing microbial genomic databases? Join the hands-on tutorial on #Loculus & learn how to set up, customize & deploy Loculus for your projects.
🔹 Tutorial organized by @chaoranchen.de & Anna Parker, from @ethz.ch
📆8 sept at #BC2Basel
👉 Register: tinyurl.com/5n8w3pwb