@ljmartin.bsky.social
Computational chemistry, cso at openbench https://ljmartin.github.io
New blog demonstrating some code examples of curve fitting with splines:

ljmartin.github.io/blog/31_spli...
Spline regression demo
ljmartin.github.io
June 17, 2025 at 10:23 PM
New blog: calculating HCT solvation in numpy. ljmartin.github.io/blog/30_hct_...
HCT solvation in numpy
or jax
ljmartin.github.io
June 12, 2025 at 7:40 PM
Reposted
Initial conditions:
m1=9.4 m2=142.4 m3=14.4 (solar masses)
v1x=-1.249 v1y=-0.389 v2x=-3.095 v2y=-2.661 v3x=-4.061 v3y=5.677 (km/s)
x1=-3.0 y1=28.0 x2=28.0 y2=-33.0 x3=-33.0 y3=-27.0 (AU from center)
Music: Prelude in C-Sharp Minor – Rachmaninoff
May 7, 2025 at 6:14 AM
Reposted
EvE Data Release 2 now live! 1.4K drugs screened vs 21 7TMs: ADRA2A, ADRA2B, ADRA2C, ADRB1, ADRB2, DRD1, DRD2, GAL1, GAL2 GHSR, HRH1, HRH3, HRH4, HTR1A, HTR1B, HTR1D, HTR1F, HTR2A, HTR5, HTR6, and PTH1R in ag & antag modes. data.evebio.org

For data drop announcements via email sign up at evebio.org
Eve Bio: Pharmome Data
Browse/download data for 1,400 FDA drugs' actions on an ever-growing collection of gene products. Data Release 1 now live.
data.evebio.org
February 10, 2025 at 7:27 PM
How to run Chai-1 on a Modal instance: ljmartin.github.io/blog/28_chai...
Chai-1 on Modal
A100s for all
ljmartin.github.io
November 27, 2024 at 10:29 PM
@evebio.bsky.social what’s the best way to use Eve’s recent data upload? I found that it was licensed for non-commercial use only. All the drug and treatment public benefits listed on the website will require a commercial angle
November 24, 2024 at 9:00 PM
Blog: combining the Kd of two ligand species, when you know their populations in solution, using scipy odeint

ljmartin.github.io/blog/27_comb...
November 20, 2024 at 6:57 PM
Blog - Running the new boltz-1 cofolding model on Modal: ljmartin.github.io/blog/26_bolt...
Boltz-1 on Modal
A100s for all
ljmartin.github.io
November 18, 2024 at 7:25 PM
cross-post: new blog: wrote a little in-browser docking viewer w NGL and RDKitJS. Mostly it's for viewing confidential structures with no software license, knowing that the data doesn't leave ur computer and is kept local! Please test it out and lmk any feedback
ljmartin.github.io/blog/19_brow...
January 26, 2024 at 1:44 AM