Lin
@linwang.bsky.social
From Cambridge @pducambridge.bsky.social. Elected member of @globalyacademy.bsky.social.
Research evolution & adaptation, immune response & memory, and synthetic biology.
"I hope some day you'll join us, and the world will be as one."
Research evolution & adaptation, immune response & memory, and synthetic biology.
"I hope some day you'll join us, and the world will be as one."
It's all about business.
August 19, 2025 at 10:25 AM
It's all about business.
ISMB/ECCB is amazing!
It's probably the best computational biology conference. I've learned a lot this week.
ISCB has a strong and rigor research culture.
Look to ECCB 2026 at Geneva next year: eccb2026.org
It's probably the best computational biology conference. I've learned a lot this week.
ISCB has a strong and rigor research culture.
Look to ECCB 2026 at Geneva next year: eccb2026.org
July 24, 2025 at 10:29 PM
ISMB/ECCB is amazing!
It's probably the best computational biology conference. I've learned a lot this week.
ISCB has a strong and rigor research culture.
Look to ECCB 2026 at Geneva next year: eccb2026.org
It's probably the best computational biology conference. I've learned a lot this week.
ISCB has a strong and rigor research culture.
Look to ECCB 2026 at Geneva next year: eccb2026.org
Reposted by Lin
Plague remains a health issue in several parts of the world—especially in Madagascar, where epidemics follow a seasonal pattern. In our new @pnas.org paper, we link that seasonality to rat and flea dynamics and quantify the impact of various control strategies. doi.org/10.1073/pnas...
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
doi.org
June 13, 2025 at 7:54 AM
Plague remains a health issue in several parts of the world—especially in Madagascar, where epidemics follow a seasonal pattern. In our new @pnas.org paper, we link that seasonality to rat and flea dynamics and quantify the impact of various control strategies. doi.org/10.1073/pnas...
Reposted by Lin
New postdoc positions with a number of exciting epidemic modelling projects opening in our Unit at @pasteur.fr in beautiful Paris. Deadline for applications: 26th June.
research.pasteur.fr/en/job/postd...
research.pasteur.fr/en/job/postd...
Postdoctoral positions in epidemic mathematical/statistical modelling - Research
Job description We are recruiting postdocs to contribute to research projects in the Mathematical Modelling of Infectious Diseases Unit, at Institut Pasteur in Paris. The candidates will be expected t...
research.pasteur.fr
June 5, 2025 at 5:22 AM
New postdoc positions with a number of exciting epidemic modelling projects opening in our Unit at @pasteur.fr in beautiful Paris. Deadline for applications: 26th June.
research.pasteur.fr/en/job/postd...
research.pasteur.fr/en/job/postd...
Reposted by Lin
Postdoc (Cambridge, UK)
SARS-CoV-2 phylogenetic and modelling project
with Henrik Salje
at University of Cambridge
More details: http://iddjobs.org/jobs/2311
SARS-CoV-2 phylogenetic and modelling project
with Henrik Salje
at University of Cambridge
More details: http://iddjobs.org/jobs/2311
May 15, 2025 at 8:08 PM
Postdoc (Cambridge, UK)
SARS-CoV-2 phylogenetic and modelling project
with Henrik Salje
at University of Cambridge
More details: http://iddjobs.org/jobs/2311
SARS-CoV-2 phylogenetic and modelling project
with Henrik Salje
at University of Cambridge
More details: http://iddjobs.org/jobs/2311
Theme 3:
Health security is national security.
Health security is national security.
April 14, 2025 at 9:06 PM
Theme 3:
Health security is national security.
Health security is national security.
Truth - The Times They Are A-Changin'
www.youtube.com/watch?v=90WD...
www.youtube.com/watch?v=90WD...
Bob Dylan - The Times They Are A-Changin' (Official Audio)
YouTube video by BobDylanVEVO
www.youtube.com
April 14, 2025 at 8:10 PM
Truth - The Times They Are A-Changin'
www.youtube.com/watch?v=90WD...
www.youtube.com/watch?v=90WD...
Reposted by Lin
Tired of fragmented bacterial GWAS workflows? Try BaGPipe (Bacterial GWAS Pipeline)—a fully automated, flexible Nextflow pipeline integrating Pyseer for streamlined association studies. Reproducible. Scalable. Efficient. doi.org/10.1101/2025...
#Nextflow #BacterialGWAS #AMR #Bioinformatics
#Nextflow #BacterialGWAS #AMR #Bioinformatics
BaGPipe: an automated, reproducible, and flexible pipeline for bacterial genome-wide association studies
Microbial genome-wide association study (GWAS) tools often require manual data processing steps, lack comprehensive workflows, and are limited by scalability issues, thus hindering the exploration of ...
doi.org
March 2, 2025 at 10:05 PM
Tired of fragmented bacterial GWAS workflows? Try BaGPipe (Bacterial GWAS Pipeline)—a fully automated, flexible Nextflow pipeline integrating Pyseer for streamlined association studies. Reproducible. Scalable. Efficient. doi.org/10.1101/2025...
#Nextflow #BacterialGWAS #AMR #Bioinformatics
#Nextflow #BacterialGWAS #AMR #Bioinformatics
Reposted by Lin
An oldie (10 y!) but goodie: cellular interaction at the top! #cellcomm
Video of a T cell (orange) interacting with a target cell (blue)
From Chen et al. @ Betzig lab (@hhmijanelia.bsky.social) game changing paper !!
Full science.org/doi/10.1126/... @focalplane.bsky.social #scicomm #microscopy 🧪🔬
Video of a T cell (orange) interacting with a target cell (blue)
From Chen et al. @ Betzig lab (@hhmijanelia.bsky.social) game changing paper !!
Full science.org/doi/10.1126/... @focalplane.bsky.social #scicomm #microscopy 🧪🔬
February 18, 2025 at 8:38 PM
An oldie (10 y!) but goodie: cellular interaction at the top! #cellcomm
Video of a T cell (orange) interacting with a target cell (blue)
From Chen et al. @ Betzig lab (@hhmijanelia.bsky.social) game changing paper !!
Full science.org/doi/10.1126/... @focalplane.bsky.social #scicomm #microscopy 🧪🔬
Video of a T cell (orange) interacting with a target cell (blue)
From Chen et al. @ Betzig lab (@hhmijanelia.bsky.social) game changing paper !!
Full science.org/doi/10.1126/... @focalplane.bsky.social #scicomm #microscopy 🧪🔬
Reposted by Lin
Serological data provide key insights on pathogen circulation. We introduce a new R package, Rsero, which is a pipeline to store and analyze age-stratified sero data, estimate the history of pathogen circulation and compare different transmission models.
journals.plos.org/ploscompbiol...
journals.plos.org/ploscompbiol...
RSero: A user-friendly R package to reconstruct pathogen circulation history from seroprevalence studies
Author summary Antibodies are immune markers of past infections. Seroprevalence studies that characterize the seropositivity status in the population have been used for decades in epidemiological stud...
journals.plos.org
February 11, 2025 at 4:21 PM
Serological data provide key insights on pathogen circulation. We introduce a new R package, Rsero, which is a pipeline to store and analyze age-stratified sero data, estimate the history of pathogen circulation and compare different transmission models.
journals.plos.org/ploscompbiol...
journals.plos.org/ploscompbiol...
"定風波" by 蘇東坡
莫聽穿林打葉聲，何妨吟嘯且徐行。
竹杖芒鞋輕勝馬，誰怕？一蓑煙雨任平生。
料峭春風吹酒醒，微冷，山頭斜照卻相迎。
回首向來蕭瑟處，歸去，也無風雨也無晴。
莫聽穿林打葉聲，何妨吟嘯且徐行。
竹杖芒鞋輕勝馬，誰怕？一蓑煙雨任平生。
料峭春風吹酒醒，微冷，山頭斜照卻相迎。
回首向來蕭瑟處，歸去，也無風雨也無晴。
February 9, 2025 at 9:17 AM
"定風波" by 蘇東坡
莫聽穿林打葉聲，何妨吟嘯且徐行。
竹杖芒鞋輕勝馬，誰怕？一蓑煙雨任平生。
料峭春風吹酒醒，微冷，山頭斜照卻相迎。
回首向來蕭瑟處，歸去，也無風雨也無晴。
莫聽穿林打葉聲，何妨吟嘯且徐行。
竹杖芒鞋輕勝馬，誰怕？一蓑煙雨任平生。
料峭春風吹酒醒，微冷，山頭斜照卻相迎。
回首向來蕭瑟處，歸去，也無風雨也無晴。
Reposted by Lin
No one best way to measure #infection risk in populations.
Cross-sectional sero: weak temporal signal, CXR, waning as we know. Extra care needed for longitudinal #serology as Ab kinetics and assay noise can mess up estimates by a lot. Cases can be powerful!
www.pnas.org/doi/10.1073/pnas.2411768121
Cross-sectional sero: weak temporal signal, CXR, waning as we know. Extra care needed for longitudinal #serology as Ab kinetics and assay noise can mess up estimates by a lot. Cases can be powerful!
www.pnas.org/doi/10.1073/pnas.2411768121
Reconciling heterogeneous dengue virus infection risk estimates from different study designs | PNAS
Uncovering rates at which susceptible individuals become infected with a pathogen,
i.e., the force of infection (FOI), is essential for assessing t...
eur03.safelinks.protection.outlook.com
January 1, 2025 at 3:19 AM
No one best way to measure #infection risk in populations.
Cross-sectional sero: weak temporal signal, CXR, waning as we know. Extra care needed for longitudinal #serology as Ab kinetics and assay noise can mess up estimates by a lot. Cases can be powerful!
www.pnas.org/doi/10.1073/pnas.2411768121
Cross-sectional sero: weak temporal signal, CXR, waning as we know. Extra care needed for longitudinal #serology as Ab kinetics and assay noise can mess up estimates by a lot. Cases can be powerful!
www.pnas.org/doi/10.1073/pnas.2411768121
Reposted by Lin
Certain sublineages of antimicrobial resistant bacteria dominate the surveillance landscape, but what causes them to become resistant? Check out our latest work in Shigella to find out and/or read the thread below www.medrxiv.org/content/10.1101/2024.10.27.24316207v2
1/n
1/n
December 19, 2024 at 8:48 PM
Certain sublineages of antimicrobial resistant bacteria dominate the surveillance landscape, but what causes them to become resistant? Check out our latest work in Shigella to find out and/or read the thread below www.medrxiv.org/content/10.1101/2024.10.27.24316207v2
1/n
1/n
Reposted by Lin
Infectious Disease Modelling starter pack update! First pack is full so I created a second one. Pls keep on sending suggestions! (bio should contain experience relevant for this pack)
IDModelling pack 1: go.bsky.app/86Ao1a5
IDModelling pack 2 : go.bsky.app/2oBB7KX
IDModelling pack 1: go.bsky.app/86Ao1a5
IDModelling pack 2 : go.bsky.app/2oBB7KX
Infectious Disease Modelling #IDModelling
Join the conversation
go.bsky.app
November 22, 2024 at 8:08 AM
Infectious Disease Modelling starter pack update! First pack is full so I created a second one. Pls keep on sending suggestions! (bio should contain experience relevant for this pack)
IDModelling pack 1: go.bsky.app/86Ao1a5
IDModelling pack 2 : go.bsky.app/2oBB7KX
IDModelling pack 1: go.bsky.app/86Ao1a5
IDModelling pack 2 : go.bsky.app/2oBB7KX
Reposted by Lin
Apologies for the website glitch - it's www.pdu.gen.cam.ac.uk
PDU | PDU
www.pdu.gen.cam.ac.uk
December 20, 2024 at 4:32 PM
Apologies for the website glitch - it's www.pdu.gen.cam.ac.uk
Reposted by Lin
Hello world! After a year in the making, the Pathogen Dynamics Unit is ready to launch! Check out our website (pdu.gen.cam.ac.uk) and follow the team (bsky.app/profile/did:...) to keep up with the latest from our infectious disease supergroup based at @geneticscam.bsky.social
December 20, 2024 at 12:28 PM
Hello world! After a year in the making, the Pathogen Dynamics Unit is ready to launch! Check out our website (pdu.gen.cam.ac.uk) and follow the team (bsky.app/profile/did:...) to keep up with the latest from our infectious disease supergroup based at @geneticscam.bsky.social