julia
@geneticjulia.bsky.social
bioinformatician at clinical genomics Uppsala
former postdoc at @cpgsthlm.bsky.social focusing on bioinformatic tools addressing questions in species conservation and evolutionary biology
am a nerdie nerd communicating only in music sci fi and memes 🧬
former postdoc at @cpgsthlm.bsky.social focusing on bioinformatic tools addressing questions in species conservation and evolutionary biology
am a nerdie nerd communicating only in music sci fi and memes 🧬
Reposted by julia
The world’s oldest #RNA extracted from #WoollyMammoth: “gives us a completely different picture” ↓ 🧪⚒️
Woolly mammoth preserved in the Siberian permafrost for nearly 40,000 years sequenced. 🖥️ 🧬
www.youtube.com/watch?v=tHQv...
Weekend reading:
www.scilifelab.se/news/worlds-...
Woolly mammoth preserved in the Siberian permafrost for nearly 40,000 years sequenced. 🖥️ 🧬
www.youtube.com/watch?v=tHQv...
Weekend reading:
www.scilifelab.se/news/worlds-...
The world’s oldest #RNA extracted from #WoollyMammoth: “gives us a completely different picture”
YouTube video by SciLifeLab
www.youtube.com
November 14, 2025 at 4:11 PM
The world’s oldest #RNA extracted from #WoollyMammoth: “gives us a completely different picture” ↓ 🧪⚒️
Woolly mammoth preserved in the Siberian permafrost for nearly 40,000 years sequenced. 🖥️ 🧬
www.youtube.com/watch?v=tHQv...
Weekend reading:
www.scilifelab.se/news/worlds-...
Woolly mammoth preserved in the Siberian permafrost for nearly 40,000 years sequenced. 🖥️ 🧬
www.youtube.com/watch?v=tHQv...
Weekend reading:
www.scilifelab.se/news/worlds-...
so proud of my former phd supervisor and former colleague (coincidentally now current colleagues again kinda!) who together with their colleagues published these cool results in JAMA oncology! 👏 @scilifelab.se
doi.org/10.1001/jamaoncol.2025.4480
doi.org/10.1001/jamaoncol.2025.4480
November 5, 2025 at 2:36 PM
so proud of my former phd supervisor and former colleague (coincidentally now current colleagues again kinda!) who together with their colleagues published these cool results in JAMA oncology! 👏 @scilifelab.se
doi.org/10.1001/jamaoncol.2025.4480
doi.org/10.1001/jamaoncol.2025.4480
Reposted by julia
🦴🧬🦴🧬🦴
Abstract submission is now open for the 1st International Conference on Palaeogenomics!
June 23–26 2026, in Stockholm.
Join researchers from across the field for 4 days and >100 talks (+ poster sessions)!
Submit abstracts here 👉
icp2026.palaeogenomics.org/abstracts/
Deadline: Nov 30th
Abstract submission is now open for the 1st International Conference on Palaeogenomics!
June 23–26 2026, in Stockholm.
Join researchers from across the field for 4 days and >100 talks (+ poster sessions)!
Submit abstracts here 👉
icp2026.palaeogenomics.org/abstracts/
Deadline: Nov 30th
October 1, 2025 at 1:28 PM
🦴🧬🦴🧬🦴
Abstract submission is now open for the 1st International Conference on Palaeogenomics!
June 23–26 2026, in Stockholm.
Join researchers from across the field for 4 days and >100 talks (+ poster sessions)!
Submit abstracts here 👉
icp2026.palaeogenomics.org/abstracts/
Deadline: Nov 30th
Abstract submission is now open for the 1st International Conference on Palaeogenomics!
June 23–26 2026, in Stockholm.
Join researchers from across the field for 4 days and >100 talks (+ poster sessions)!
Submit abstracts here 👉
icp2026.palaeogenomics.org/abstracts/
Deadline: Nov 30th
not with me on it, but if you are curious about workflows for non model organisms that can help in quantifying high impact variants and hopefully genetic load, find the poster P03.060 today - the one with the boaring pig in the bottom 🫡
#ESEB2025
(sorry for the shitty contrast in header :( )
#ESEB2025
(sorry for the shitty contrast in header :( )
August 21, 2025 at 9:22 AM
not with me on it, but if you are curious about workflows for non model organisms that can help in quantifying high impact variants and hopefully genetic load, find the poster P03.060 today - the one with the boaring pig in the bottom 🫡
#ESEB2025
(sorry for the shitty contrast in header :( )
#ESEB2025
(sorry for the shitty contrast in header :( )
Reposted by julia
The @cpgsthlm.bsky.social gang at #eseb2025 in Barcelona 🇪🇸 Big museomics day with bears, bison & bumblebees 🐻🐮🐝🧬
August 20, 2025 at 9:06 PM
The @cpgsthlm.bsky.social gang at #eseb2025 in Barcelona 🇪🇸 Big museomics day with bears, bison & bumblebees 🐻🐮🐝🧬
#ESEB2025
museomics:
lastly, please help @alexgilardet.bsky.social help George ask Love to invest in automatic robots to help in the lab 💪
or follow the new methods and validations developed by Alex that he is explaining today in his talk!
(sorry for the rainbow effect)
@cpgsthlm.bsky.social
museomics:
lastly, please help @alexgilardet.bsky.social help George ask Love to invest in automatic robots to help in the lab 💪
or follow the new methods and validations developed by Alex that he is explaining today in his talk!
(sorry for the rainbow effect)
@cpgsthlm.bsky.social
August 20, 2025 at 10:04 AM
#ESEB2025
museomics:
lastly, please help @alexgilardet.bsky.social help George ask Love to invest in automatic robots to help in the lab 💪
or follow the new methods and validations developed by Alex that he is explaining today in his talk!
(sorry for the rainbow effect)
@cpgsthlm.bsky.social
museomics:
lastly, please help @alexgilardet.bsky.social help George ask Love to invest in automatic robots to help in the lab 💪
or follow the new methods and validations developed by Alex that he is explaining today in his talk!
(sorry for the rainbow effect)
@cpgsthlm.bsky.social
#ESEB2025
museumics:
followed up by our own bumblebee guy Michael Mitschke, talking about insect decline in cuties like bombus pascorum ik Sweden 🐝
@cpgsthlm.bsky.social
museumics:
followed up by our own bumblebee guy Michael Mitschke, talking about insect decline in cuties like bombus pascorum ik Sweden 🐝
@cpgsthlm.bsky.social
August 20, 2025 at 9:49 AM
#ESEB2025
museumics:
followed up by our own bumblebee guy Michael Mitschke, talking about insect decline in cuties like bombus pascorum ik Sweden 🐝
@cpgsthlm.bsky.social
museumics:
followed up by our own bumblebee guy Michael Mitschke, talking about insect decline in cuties like bombus pascorum ik Sweden 🐝
@cpgsthlm.bsky.social
#ESEB2025
great talks in the museomics session, including @amandalindahl.bsky.social giving a great talk on her first (!!) conference 👏 🐻
great talks in the museomics session, including @amandalindahl.bsky.social giving a great talk on her first (!!) conference 👏 🐻
August 20, 2025 at 9:16 AM
#ESEB2025
great talks in the museomics session, including @amandalindahl.bsky.social giving a great talk on her first (!!) conference 👏 🐻
great talks in the museomics session, including @amandalindahl.bsky.social giving a great talk on her first (!!) conference 👏 🐻
interested in deleteuorius mutations and genetic load quantification in non model organisms?
visit me on Thursday 💪 🧬 🐗
poster P03.060
#ESEB2025
visit me on Thursday 💪 🧬 🐗
poster P03.060
#ESEB2025
August 19, 2025 at 9:13 AM
interested in deleteuorius mutations and genetic load quantification in non model organisms?
visit me on Thursday 💪 🧬 🐗
poster P03.060
#ESEB2025
visit me on Thursday 💪 🧬 🐗
poster P03.060
#ESEB2025
first day of @eseb2025.bsky.social in Barcelona is off to a great start !
first with a deep time mammoth talk with @knmoreland.bsky.social , then a little chat with @ergabiodiv.bsky.social ,
followed by some ecology and then some duplications on the schedule.
first with a deep time mammoth talk with @knmoreland.bsky.social , then a little chat with @ergabiodiv.bsky.social ,
followed by some ecology and then some duplications on the schedule.
August 18, 2025 at 12:29 PM
first day of @eseb2025.bsky.social in Barcelona is off to a great start !
first with a deep time mammoth talk with @knmoreland.bsky.social , then a little chat with @ergabiodiv.bsky.social ,
followed by some ecology and then some duplications on the schedule.
first with a deep time mammoth talk with @knmoreland.bsky.social , then a little chat with @ergabiodiv.bsky.social ,
followed by some ecology and then some duplications on the schedule.
Reposted by julia
I am starting a computational lab at LIOS, Riga, Latvia, and going to recruit a few people. Please DM if you are interested in a postdoc or PhD position in my Metabolic Research Group within the TARGETWISE project. I can highly recommend Riga, it is a beautiful city with very good living conditions.
July 18, 2025 at 9:03 AM
I am starting a computational lab at LIOS, Riga, Latvia, and going to recruit a few people. Please DM if you are interested in a postdoc or PhD position in my Metabolic Research Group within the TARGETWISE project. I can highly recommend Riga, it is a beautiful city with very good living conditions.
that feeling when your prediction model accuracy including 10 fold cross validation turns out surprisingly well but you dont trust it and are afraid it is overfitted...
a poster for batman caped crusader shows a man in a suit and tie asking should i be worried
ALT: a poster for batman caped crusader shows a man in a suit and tie asking should i be worried
media.tenor.com
July 25, 2025 at 5:44 PM
that feeling when your prediction model accuracy including 10 fold cross validation turns out surprisingly well but you dont trust it and are afraid it is overfitted...
Reposted by julia
Postdoctoral Position in Wildlife Palaeogenomics!
Come join us in beautiful Stockholm!
su.varbi.com/en/what:job/...
Come join us in beautiful Stockholm!
su.varbi.com/en/what:job/...
June 4, 2025 at 5:44 AM
Postdoctoral Position in Wildlife Palaeogenomics!
Come join us in beautiful Stockholm!
su.varbi.com/en/what:job/...
Come join us in beautiful Stockholm!
su.varbi.com/en/what:job/...
That feeling when you are in a focus group meeting discussing eDNA to measure and monitor biodiversity and pros and cons, and Amanda's review exploring exactly that pops up in your feed
💪🎉
congrats @amandalindahl.bsky.social for your first publication!
#biodiversity #PhD
💪🎉
congrats @amandalindahl.bsky.social for your first publication!
#biodiversity #PhD
New paper 🚨
This review led by #CPGstlhm researchers @amandalindahl.bsky.social @indianadiez.bsky.social @lovedalen.bsky.social and @palaeopete.bsky.social explores how #ancientDNA 🧬 can be used to investigate all hierarchical levels of #biodiversity across time ⌚
👉 www.nature.com/articles/s44...
This review led by #CPGstlhm researchers @amandalindahl.bsky.social @indianadiez.bsky.social @lovedalen.bsky.social and @palaeopete.bsky.social explores how #ancientDNA 🧬 can be used to investigate all hierarchical levels of #biodiversity across time ⌚
👉 www.nature.com/articles/s44...
Palaeogenomic inference of biodiversity dynamics across Quaternary timescales - Nature Reviews Biodiversity
This Review explores the utility of palaeogenomics for exploring past biodiversity trends and ecosystem responses to a changing world, including natural climate cycles and increasing human activity.
www.nature.com
March 19, 2025 at 2:22 PM
That feeling when you are in a focus group meeting discussing eDNA to measure and monitor biodiversity and pros and cons, and Amanda's review exploring exactly that pops up in your feed
💪🎉
congrats @amandalindahl.bsky.social for your first publication!
#biodiversity #PhD
💪🎉
congrats @amandalindahl.bsky.social for your first publication!
#biodiversity #PhD
Reposted by julia
Preprint alert: FlyCADD! 🧬
Excited to share FlyCADD: impact prediction tool scoring the functional impact of any single nucleotide variant across the entire Drosophila melanogaster genome, to distinguish causal from neutral SNPs
www.biorxiv.org/content/10.1...
Excited to share FlyCADD: impact prediction tool scoring the functional impact of any single nucleotide variant across the entire Drosophila melanogaster genome, to distinguish causal from neutral SNPs
www.biorxiv.org/content/10.1...
Predicting the functional impact of single nucleotide variants in Drosophila melanogaster with FlyCADD
Understanding how genetic variants drive phenotypic differences is a major challenge in molecular biology. Single nucleotide polymorphisms form the vast majority of genetic variation and play critical...
www.biorxiv.org
March 7, 2025 at 2:14 PM
Preprint alert: FlyCADD! 🧬
Excited to share FlyCADD: impact prediction tool scoring the functional impact of any single nucleotide variant across the entire Drosophila melanogaster genome, to distinguish causal from neutral SNPs
www.biorxiv.org/content/10.1...
Excited to share FlyCADD: impact prediction tool scoring the functional impact of any single nucleotide variant across the entire Drosophila melanogaster genome, to distinguish causal from neutral SNPs
www.biorxiv.org/content/10.1...
pre-print alert! my Dutch colleague @juliabeets.bsky.social just put her first PhD chapter out as preprint !
she has reworked the Kircher et al 2014 CADD for drosophila 💪
bit.ly/FlyCADD
she has reworked the Kircher et al 2014 CADD for drosophila 💪
bit.ly/FlyCADD
Predicting the functional impact of single nucleotide variants in Drosophila melanogaster with FlyCADD
Understanding how genetic variants drive phenotypic differences is a major challenge in molecular biology. Single nucleotide polymorphisms form the vast majority of genetic variation and play critical...
bit.ly
March 7, 2025 at 9:26 AM
pre-print alert! my Dutch colleague @juliabeets.bsky.social just put her first PhD chapter out as preprint !
she has reworked the Kircher et al 2014 CADD for drosophila 💪
bit.ly/FlyCADD
she has reworked the Kircher et al 2014 CADD for drosophila 💪
bit.ly/FlyCADD
Reposted by julia
Congrats to Samantha López Clinton for the successful half-time PhD seminar 🎉
February 20, 2025 at 6:21 PM
Congrats to Samantha López Clinton for the successful half-time PhD seminar 🎉
Reposted by julia
Congrats to our students @alexgilardet.bsky.social and Chenyu Jin for their successful Licentiate defense and half-time PhD seminar! 🎉
February 14, 2025 at 12:33 PM
Congrats to our students @alexgilardet.bsky.social and Chenyu Jin for their successful Licentiate defense and half-time PhD seminar! 🎉
happy birthday @cpgsthlm.bsky.social 🥳🎉🥳
February 20, 2025 at 1:41 PM
happy birthday @cpgsthlm.bsky.social 🥳🎉🥳
Reposted by julia
A high-throughput aDNA extraction method for large-scale sample screening 🦣🦬🧬
onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com/doi/10.1111/...
A High‐Throughput Ancient DNA Extraction Method for Large‐Scale Sample Screening
Large-scale DNA screening of palaeontological and archaeological collections remains a limiting and costly factor for ancient DNA studies. Several DNA extraction protocols are routinely used in ancie...
onlinelibrary.wiley.com
February 6, 2025 at 3:41 PM
A high-throughput aDNA extraction method for large-scale sample screening 🦣🦬🧬
onlinelibrary.wiley.com/doi/10.1111/...
onlinelibrary.wiley.com/doi/10.1111/...
I attended last year, and highly recommend it - even as a postdoc having a long(er) background in popgen!
After not having been active in popgen during my PhD, this course was the perfect mix of freshening up old knowledge and getting the latest state-of-the-art solutions and updates.
After not having been active in popgen during my PhD, this course was the perfect mix of freshening up old knowledge and getting the latest state-of-the-art solutions and updates.
The NBIS course "Population Genomics in Practice", held 15-19 September in Uppsala, is now open for applications! Join us to learn more about how to handle and analyze population genomic data. Deadline to apply: May 15! www.scilifelab.se/event/popula...
Population Genomics in Practice
The “Population Genomics in Practice” course is open for PhD students, postdocs, researchers, and other employees in Swedish universities, who need hands-on and practical skills to analyze population ...
www.scilifelab.se
January 21, 2025 at 1:23 PM
I attended last year, and highly recommend it - even as a postdoc having a long(er) background in popgen!
After not having been active in popgen during my PhD, this course was the perfect mix of freshening up old knowledge and getting the latest state-of-the-art solutions and updates.
After not having been active in popgen during my PhD, this course was the perfect mix of freshening up old knowledge and getting the latest state-of-the-art solutions and updates.
happy to have just shared my latest results at the @scilifelab.se #evolution conference in Linköping 💪💪
January 15, 2025 at 10:48 AM
happy to have just shared my latest results at the @scilifelab.se #evolution conference in Linköping 💪💪
yay my PhD little brother's latest article is out 🥳
@schmytzi
great work from @AJStatGenet and colleagues
#phdlife #AcademicChatter
x.com/_adameur/statu…
@schmytzi
great work from @AJStatGenet and colleagues
#phdlife #AcademicChatter
x.com/_adameur/statu…
December 17, 2024 at 9:13 AM
yay my PhD little brother's latest article is out 🥳
@schmytzi
great work from @AJStatGenet and colleagues
#phdlife #AcademicChatter
x.com/_adameur/statu…
@schmytzi
great work from @AJStatGenet and colleagues
#phdlife #AcademicChatter
x.com/_adameur/statu…
how to channel you inner confidence
December 17, 2024 at 9:13 AM
how to channel you inner confidence
