Gareth Thomas
gathomas12.bsky.social
Gareth Thomas
@gathomas12.bsky.social
Plant health policy, biosecurity, chemical ecology. Views are my own. He/him
🚨New pre-print: we show that the beneficial soil fungus Trichoderma hamatum GD12 uses volatile organic compounds (VOCs) to suppress crop pathogens. Link to the study here:
www.biorxiv.org/content/10.1...
Inducible volatile chemical signalling drives antifungal activity of Trichoderma hamatum GD12 during confrontation with the pathogen Sclerotinia sclerotiorum
BACKGROUND: The use of beneficial soil fungi or their natural products offers a more sustainable alternative to synthetic fungicides for pathogen management in crops. Volatile organic compounds (VOCs) produced by such fungi act as semiochemicals that inhibit pathogens, with VOC production influenced by physical interactions between competing fungi. This study explores the interaction between the beneficial soil fungus Trichoderma hamatum GD12 strain (GD12), previously shown to antagonize crop pathogens such as Sclerotinia sclerotiorum, to test the hypothesis that its antagonistic effect is mediated by volatile chemical signalling. A GD12 mutant deficient in the chitinolytic enzyme N-acetyl-β-glucosaminidase ΔThnag::hph, which shows reduced biocontrol activity, was also examined. RESULTS: In dual-culture confrontation assays, co-inoculation of GD12 and S. sclerotiorum led to fungistatic interactions after 7 days, whereas ΔThnag::hph showed no antagonism, indicating a loss of antagonistic function. VOCs collected from individual and co-cultures were analysed by gas chromatography - flame ionization detector (GC-FID) analysis and coupled GC-mass spectrometry (GC-MS), revealing significant differences in VOC production between treatments, with VOC production notably upregulated in the GD12 + S. sclerotiorum co-culture. Peak production of 6-pentyl-2H-pyran-2-one occurred 17 days post-inoculation. This upregulation was absent in the ΔThnag::hph co-culture, suggesting VOCs may drive antagonism. Synthetic VOC assays revealed several compounds inhibitory to S. sclerotiorum, including 1-octen-3-one, which also arrested the growth of key fungal pathogens (Botrytis cinerea, Pyrenopeziza brassicae, and Gaeumannomyces tritici). Structural insights into 1-octen-3-one's antifungal activity against S. sclerotiorum are also presented. CONCLUSIONS: These findings support the hypothesis that the antagonistic properties of T. hamatum GD12 against crop fungal pathogens can, in part, be attributed to VOC production. Further research is needed to assess the potential of these semiochemicals as tools for pathogen management in agriculture. ### Competing Interest Statement The authors have declared no competing interest. Biotechnology and Biological Sciences Research Council, https://ror.org/00cwqg982, BB/X010953/1, BBS/E/RH/230003A, BBS/OS/CP/000001, 1622285
www.biorxiv.org
July 9, 2025 at 11:31 AM
Reposted by Gareth Thomas
🚨 New preprint!
We've developed a bioassay-guided genome mining approach to identify bacterial secondary metabolites that inhibit Zymoseptoria tritici — a major fungal pathogen of wheat.
Available now on bioRxiv: doi.org/10.1101/2025...
Development of a bioassay guided genome mining approach for antifungal natural product discovery from pseudomonads
Zymoseptoria tritici causes Septoria Leaf Blotch disease of wheat and has evolved to overcome most chemical and genetic control methods. As such, new tools are required for future disease control. We...
doi.org
June 3, 2025 at 8:08 AM
Great day at the Oak Health & Plant Biosecurity Event at Kew Gardens, hearing updates on oak health research and visiting Kew’s oak collection! @actionoak.bsky.social @rbgkew.bsky.social #ActionOak #PlantHealth
May 13, 2025 at 3:55 PM
Reposted by Gareth Thomas
📢New Paper! Identifying subtle differences in the molecular structure of a sex pheromone could ultimately help protect vital stored legume crops from the destructive dried bean beetle. 🫘🪲 @royentsoc.bsky.social
Full story 👇
www.rothamsted.ac.uk/news/bean-be...
April 9, 2025 at 10:27 AM
Reposted by Gareth Thomas
Tree-killing beetle found to be attracted to Britain’s most common spruce
Tree-killing beetle found to be attracted to Britain’s most common spruce
Discovery of pest in UK raises fears for Sitka spruce, which accounts for half of country’s commercial plantations A beetle that has previously devastated Norway spruce populations across continental Europe has been found to be equally attracted to the…
www.theguardian.com
February 17, 2025 at 2:00 PM
Great to be involved with this study- we show that the eight-toothed spruce bark beetle (Ips typographus) can identify and colonize both Sitka and Norway spruce trees, providing insights for the management of the forest pest #ChemicalEcology #PestManagement
📢New paper! Beetle threat to Sitka Spruce plantations 🌲🌲🌲Eight toothed spruce bark beetle 🪲shows a marked preference for fresh cut Sitka wood. New study with
@forestresearchuk.bsky.social
Full story 👇
www.rothamsted.ac.uk/news/new-bee...
February 13, 2025 at 8:35 AM
Reposted by Gareth Thomas
It's so nice being back at #MMEG2024 in Southampton finally presenting the results of our study in insect-bacteria interactions @jamesemcdonald.bsky.social @gathomas12.bsky.social
December 16, 2024 at 10:37 PM
A new protocol from the Chemical Ecology group @rothamsted.bsky.social has now been published on @protocolsio.bsky.social: 'Using dynamic headspace collections for bacterial volatile sampling'.

Link: www.protocols.io/view/using-d...

#ChemicalEcology #Microbiology #Volatiles #Semiochemicals
Using dynamic headspace collections for bacterial volatile sampling
This protocol describes a step-by-step guide for sampling Volatile Organic Compounds (VOCs) from the headspace of bacterial cultures, using dynamic headspace collections.
www.protocols.io
December 4, 2024 at 6:59 PM
Reposted by Gareth Thomas
Hi #ChemicalEcologists,

Just created a starter package for networking people in our field 😆 Please let me know if people need to be added!

go.bsky.app/KzwBnhN
December 1, 2024 at 3:13 PM
Reposted by Gareth Thomas
I'm excited to announce a PhD studentship, based at UofYork, exploring how land management in African savanna affects climate, past and present. I'm joined by the fabulous
Prof Colin Beale & @sabineclarke.bsky.social
to join historic delivery of ecosystem functions with future savanna management.
November 28, 2024 at 9:30 PM
Just over one month left to submit to our Special Issue in Pest Management Science: "Harnessing Chemical Ecology for Improved Pest Management" 🪲🌿

Deadline: December 31, 2024

📖 Learn more and submit here:

scijournals.onlinelibrary.wiley.com/hub/journal/...

Please share!
Pest Management Science Call for Papers Special issue: Harnessing Chemical Ecology for Improved Pest management.
This special issue welcomes original research and review papers relating to all aspects of how chemical ecology can be used to address crop security challenges, including the following suggested topics:
scijournals.onlinelibrary.wiley.com
November 24, 2024 at 12:17 PM
Reposted by Gareth Thomas
"Unlock Nature's Potential" Join @drjohnphreade.bsky.social, @ipmtom.bsky.social, @randybenjamin.bsky.social and me for a funded #PhD at HAU!

Optimise plant essential oil biopesticides for integrated pest management.

More info: warwick.ac.uk/fac/cross_fa...

#Sustainability #AgTech #EcoFriendly
October 30, 2023 at 5:47 PM
Reposted by Gareth Thomas
Fully-funded PhD position with Gareth Thomas @rothamsted.bsky.social and myself on entomopathogenic fungi and pest-host-parasitoid interactions 🌽

DEADLINE 11 December

Apply here 👉

www.swbio.ac.uk/programme/ho...
November 19, 2024 at 11:05 AM