Anja (she/her)
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anja1.bsky.social
Anja (she/her)
@anja1.bsky.social
symbiosis, tree of life, biodiversity
Reposted by Anja (she/her)
Our analyses converge on a narrow archaeal root region at/near the base of the Euryarchaeota, supporting hypotheses in which the Last Archaeal Common Ancestor was a complex, free-living (hyper-)thermophilic methanogen.
November 13, 2025 at 7:28 PM
Reposted by Anja (she/her)
In this project, we investigated the root of Archaea using a range of phylogenetic approaches, including the best available site- and branch-heterogeneous substitution models, and new gene tree-species tree reconciliation models.
doi.org/10.1093/bioi...
AleRax: a tool for gene and species tree co-estimation and reconciliation under a probabilistic model of gene duplication, transfer, and loss
AbstractMotivation. Genomes are a rich source of information on the pattern and process of evolution across biological scales. How best to make use of that
doi.org
November 13, 2025 at 7:28 PM
Reposted by Anja (she/her)
There's a PhD position now available with me in Bath, on the evolution of symbiosis. www.findaphd.com/phds/project.... The supervisory team also includes @anja1.bsky.social @phil-donoghue.bsky.social and others. NB, this is open both to UK-based students *and* to international students :)
The genomic basis of symbiotic integration at University of Bath on FindAPhD.com
PhD Project - The genomic basis of symbiotic integration at University of Bath, listed on FindAPhD.com
www.findaphd.com
October 9, 2025 at 9:39 AM
Reposted by Anja (she/her)
Huang, @tweethinking.bsky.social, Sepang et al. use phylogenetic analyses to reveal that the Njordarchaeales and Panguiarchaeales constitute the new class Njordarchaeia within Asgard archaea.

🔗 doi.org/10.1093/molbev/msaf201

#evobio #molbio #archaea
Phylogenomic Analyses Reveal that Panguiarchaeum Is a Clade of Genome-Reduced Asgard Archaea Within the Njordarchaeia
Abstract. The Asgard archaea are a diverse archaeal phylum important for our understanding of cellular evolution because they include the lineage that gave
doi.org
September 8, 2025 at 4:50 PM
Reposted by Anja (she/her)
I gave a symposium talk at the European Society for Evolutionary Biology 2025 (#eseb2025) meeting last week and this was my title slide showcasing how I was speaking as an independent scientist because @dalhousieu.bsky.social @dalhousie.bsky.social has locked us out.
August 25, 2025 at 12:09 PM
Reposted by Anja (she/her)
New preprint up now!

Interested in the evolution of halophily within DPANN archaea we decided to investigate the sister phylum to the Nanohaloarchaeota, GTDB phylum EX4484-52, for which we propose the name Caliditerrarchaeota
www.biorxiv.org/content/10.1...
Caliditerrarchaeota, a new sister to Nanohaloarchaeota, provides insights into the evolution of DPANN halophily
The Nanohaloarchaeota are a clade of halophilic symbionts with small cells and genomes. Originally placed within the Euryarchaeota, they are now widely thought to belong to the DPANN archaea. However,...
www.biorxiv.org
August 8, 2025 at 6:49 AM
Reposted by Anja (she/her)
Learn about the EMBO Fellowship Programme and the EMBO Scientific Exchange Grants in the upcoming #webinar we are co-organizing with the #Japan Science and Technology Agency on 3 June from 16:00–17:00 JST. 🧪

Register by 29 May: buff.ly/pF9qM6m
#funding #opportunity
May 23, 2025 at 7:54 AM
Reposted by Anja (she/her)
#Asgard,#phylogeny
1/ 🧵 Does MAGs contamination affect the placement of Njord as suggested by Zhang et al, 2025? www.nature.com/articles/s41...
Our updated analysis suggests instead... www.biorxiv.org/content/10.1...
Phylogenomic analyses reveal that Panguiarchaeum is a clade of genome-reduced Asgard archaea within the Njordarchaeia
The Asgard archaea are a diverse archaeal phylum important for our understanding of cellular evolution because they include the lineage that gave rise to eukaryotes. Recent phylogenomic work has focus...
www.biorxiv.org
May 23, 2025 at 10:19 AM
Reposted by Anja (she/her)
New vacancy in my team!

PhD student position on microbial genome evolution, focusing on the evolutionary principles underlying bacterial genome architecture.

Please repost and share with talented MSc students in #evobio, bioinformatics or related :)

www.uu.nl/en/organisat...

#MEvoSky #MicroSky
May 14, 2025 at 2:07 PM
Reposted by Anja (she/her)
Great Mentor, Exciting project, Fun city. What more could you wish for!?
New vacancy in my team!

PhD student position on microbial genome evolution, focusing on the evolutionary principles underlying bacterial genome architecture.

Please repost and share with talented MSc students in #evobio, bioinformatics or related :)

www.uu.nl/en/organisat...

#MEvoSky #MicroSky
May 15, 2025 at 8:19 AM
Reposted by Anja (she/her)
The core #anammox redox reaction system of 12 anammox bacterial genera and their evolution and application implications #Brocadia #Kuenenia #Scalindua #Jettenia #hydrazine #nitrate www.sciencedirect.com/science/arti...
March 27, 2025 at 7:46 AM
Reposted by Anja (she/her)
Originally defined by Rinke et al. (2013) as Candidatus Patescibacteria, the phylum #Patescibacteriota now has a validly published name and an official type!

Explore the lifestyle, biogeography, and metabolic capabilities of its type genus, #Patescibacterium, here: doi.org/10.1093/isme...

#SeqCode
Proposal of Patescibacterium danicum gen. nov., sp. nov. in the ubiquitous bacterial phylum Patescibacteriota phyl. nov.
Abstract. Candidatus Patescibacteria is a diverse bacterial phylum that is notable for members with ultrasmall cell size, reduced genomes, limited metaboli
doi.org
February 11, 2025 at 7:05 PM
Reposted by Anja (she/her)
Asgardarchaea & Alphaproteobacteria: key players for the assembly eukaryotic central carbon metabolism! Our new study reveals their gene contributions to glycolysis & TCA cycle, supporting synthrophic scenarios of eukaryogenesis.
rdcu.be/eb0aK
Chimeric origins and dynamic evolution of central carbon metabolism in eukaryotes
Nature Ecology & Evolution - Analysis of the eukaryotic gene repertoires mediating central carbon metabolism identifies ancestral contributions from Alphaproteobacteria, Asgardarchaeota and...
rdcu.be
March 3, 2025 at 1:28 PM
Reposted by Anja (she/her)
www.biorxiv.org/content/10.1... A new collaborative paper with Anja Spang, Wen-Cong Huang, @chrisrinke.bsky.social @ettema.bsky.social @ssolo.bsky.social Zheng-Shuang Hua Maraike Probst and Lenard Szantho. We investigated the phylogenetic position and metabolic evolution of Panguiarchaeum.
Phylogenomic analyses reveal that Panguiarchaeum is a clade of genome-reduced Asgard archaea
The Asgard archaea are a diverse archaeal phylum that includes the host lineage from which eukaryotes evolved. Due to the importance of the Asgard archaea for our understanding of cellular evolution a...
www.biorxiv.org
February 17, 2025 at 4:59 PM
Are you interested in studying archaea with their diverse symbionts? We look forward hearing from you: workingat.nioz.nl/o/postdoc-po...
NIOZ - Postdoc position: “to elucidate the role of archaeal symbionts in cellular evolution and ecology”
The EvoSym Team within the Department of Marine Microbiology and Biogeochemistry (MMB) located at the Netherlands Institute for Sea Research (NIOZ), is looking for a postdoctoral researcher with a bac
workingat.nioz.nl
February 12, 2025 at 11:26 AM
Reposted by Anja (she/her)
Fully Funded PhD Opportunity in Evolutionary Biology at the U of Rhode Island. Join us to explore the origin and early evolution of eukaryotes using cutting-edge comparative (meta)genomics and molecular evolution approaches. Applications are due December 15th. Contact me ASAP at laura.eme@uri.edu
November 15, 2024 at 6:10 PM
Reposted by Anja (she/her)
Microbial people! Especially postdocs and maybe some assistant professors who are feeling antsy ... the University of Montana is doing a search for a microbiologist! This is a great department, in a great place. (I worked there for 10 years, loved it, ping me with Qs)

apply.interfolio.com/159494
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November 19, 2024 at 7:27 PM