Alicia Oshlack
@aliciao.bsky.social
Bioinformatics and Computational Biology. Australia
Reposted by Alicia Oshlack
barbieQ: An R software package for analysing barcode count data from clonal tracking experiments https://www.biorxiv.org/content/10.1101/2025.09.11.675529v1
September 15, 2025 at 2:48 AM
barbieQ: An R software package for analysing barcode count data from clonal tracking experiments https://www.biorxiv.org/content/10.1101/2025.09.11.675529v1
Reposted by Alicia Oshlack
Great work by our PhD student @fei-liyang.bsky.social in developing a @bioconductor.bsky.social package for the statistical analysis of barcode counts from clonal tracking/lineage tracing experiments. Preprint out now! 🎉
Catch her at the #EuroBioC2025 and #EMBOlineageTracing conferences.
Catch her at the #EuroBioC2025 and #EMBOlineageTracing conferences.
BarbieQ: Our new paper outlining our bioconductor package for the statistical analysis of barcode count data. Lineage tracing and clonal tracking. They made us add the Q
September 16, 2025 at 1:57 AM
Great work by our PhD student @fei-liyang.bsky.social in developing a @bioconductor.bsky.social package for the statistical analysis of barcode counts from clonal tracking/lineage tracing experiments. Preprint out now! 🎉
Catch her at the #EuroBioC2025 and #EMBOlineageTracing conferences.
Catch her at the #EuroBioC2025 and #EMBOlineageTracing conferences.
BarbieQ: Our new paper outlining our bioconductor package for the statistical analysis of barcode count data. Lineage tracing and clonal tracking. They made us add the Q
September 16, 2025 at 12:42 AM
BarbieQ: Our new paper outlining our bioconductor package for the statistical analysis of barcode count data. Lineage tracing and clonal tracking. They made us add the Q
Reposted by Alicia Oshlack
Early bird deadline extended for #AGTA #AGTA2025
This year will be quite different, with a big focus on tech, low cost Rego, digital engagement, and in a central location.
Don't miss the ECR events, exhibitor lounges (à la AGBT) and two lightning talk sessions, open to industry members: agta2025.com
This year will be quite different, with a big focus on tech, low cost Rego, digital engagement, and in a central location.
Don't miss the ECR events, exhibitor lounges (à la AGBT) and two lightning talk sessions, open to industry members: agta2025.com
September 2, 2025 at 3:16 AM
Early bird deadline extended for #AGTA #AGTA2025
This year will be quite different, with a big focus on tech, low cost Rego, digital engagement, and in a central location.
Don't miss the ECR events, exhibitor lounges (à la AGBT) and two lightning talk sessions, open to industry members: agta2025.com
This year will be quite different, with a big focus on tech, low cost Rego, digital engagement, and in a central location.
Don't miss the ECR events, exhibitor lounges (à la AGBT) and two lightning talk sessions, open to industry members: agta2025.com
Reposted by Alicia Oshlack
🚨 Less than 48 hours left! 🚨
Abstract submissions for #ABACBS2025 close midnight Friday, Aug 15 — no extensions.
www.abacbs.org/abacbs2025
Abstract submissions for #ABACBS2025 close midnight Friday, Aug 15 — no extensions.
www.abacbs.org/abacbs2025
ABACBS 2025 Conference
Adelaide, South Australia. Nov. 24-
www.abacbs.org
August 14, 2025 at 1:01 AM
🚨 Less than 48 hours left! 🚨
Abstract submissions for #ABACBS2025 close midnight Friday, Aug 15 — no extensions.
www.abacbs.org/abacbs2025
Abstract submissions for #ABACBS2025 close midnight Friday, Aug 15 — no extensions.
www.abacbs.org/abacbs2025
Reposted by Alicia Oshlack
Initial findings from the DecodeME genome-wide association study of myalgic encephalomyelitis/chronic fatigue syndrome now on medRXiv
www.medrxiv.org/content/10.1...
www.medrxiv.org/content/10.1...
August 9, 2025 at 8:32 AM
Initial findings from the DecodeME genome-wide association study of myalgic encephalomyelitis/chronic fatigue syndrome now on medRXiv
www.medrxiv.org/content/10.1...
www.medrxiv.org/content/10.1...
Reposted by Alicia Oshlack
🌅🐦⬛Early bird Registration for #AGTA2025 is live!
Submit your abstract 📝 and check-out the awesome 🗓️ program here ➡️ agta2025.org
Submit your abstract 📝 and check-out the awesome 🗓️ program here ➡️ agta2025.org
July 8, 2025 at 5:55 AM
🌅🐦⬛Early bird Registration for #AGTA2025 is live!
Submit your abstract 📝 and check-out the awesome 🗓️ program here ➡️ agta2025.org
Submit your abstract 📝 and check-out the awesome 🗓️ program here ➡️ agta2025.org
Reposted by Alicia Oshlack
The day is finally here! 🎉 We’re releasing the invited speaker line-up, key dates, and lots more info for ABACBS 2025.
Check it out and share widely: www.abacbs.org/abacbs2025
Registrations and abstract submissions open next week, with abstracts due in August!
Check it out and share widely: www.abacbs.org/abacbs2025
Registrations and abstract submissions open next week, with abstracts due in August!
ABACBS 2025 Conference
Adelaide, South Australia. Nov. 24-
www.abacbs.org
July 4, 2025 at 4:34 AM
The day is finally here! 🎉 We’re releasing the invited speaker line-up, key dates, and lots more info for ABACBS 2025.
Check it out and share widely: www.abacbs.org/abacbs2025
Registrations and abstract submissions open next week, with abstracts due in August!
Check it out and share widely: www.abacbs.org/abacbs2025
Registrations and abstract submissions open next week, with abstracts due in August!
Excited to be attending Cancer Bioinformatics Australia (CBA) in Sydney today! @cancerbioinfoau.bsky.social Chelsea Mayo opening
June 17, 2025 at 10:57 PM
Excited to be attending Cancer Bioinformatics Australia (CBA) in Sydney today! @cancerbioinfoau.bsky.social Chelsea Mayo opening
Reposted by Alicia Oshlack
In case you went home early, @shalinhnaik.bsky.social did sing 🎤 #ozsinglecell2025
May 23, 2025 at 4:35 AM
In case you went home early, @shalinhnaik.bsky.social did sing 🎤 #ozsinglecell2025
Reposted by Alicia Oshlack
We hope you’re loving #ozsinglecell2025. Some amazing single cell science and technology on display!
May 22, 2025 at 6:30 AM
We hope you’re loving #ozsinglecell2025. Some amazing single cell science and technology on display!
Reposted by Alicia Oshlack
Joseph Powell welcomes everyone to the start of #ozsinglecell2025!
May 21, 2025 at 4:36 AM
Joseph Powell welcomes everyone to the start of #ozsinglecell2025!
Reposted by Alicia Oshlack
Ready to for some amazing single cell science @ozsinglecell.bsky.social!
May 21, 2025 at 4:29 AM
Ready to for some amazing single cell science @ozsinglecell.bsky.social!
On my way to Sydney for some @ozsinglecell.bsky.social fun #ozsinglecell2025
May 21, 2025 at 12:46 AM
On my way to Sydney for some @ozsinglecell.bsky.social fun #ozsinglecell2025
Reposted by Alicia Oshlack
We had a great morning session, including a keynote on single cells and long reads @aliciao.bsky.social, and talks on spatial transcriptomics
@rohitsingh8080.bsky.social, DNA storage, and TAD inference
@rohitsingh8080.bsky.social, DNA storage, and TAD inference
April 25, 2025 at 2:47 AM
We had a great morning session, including a keynote on single cells and long reads @aliciao.bsky.social, and talks on spatial transcriptomics
@rohitsingh8080.bsky.social, DNA storage, and TAD inference
@rohitsingh8080.bsky.social, DNA storage, and TAD inference
Reposted by Alicia Oshlack
April 25, 2025 at 12:40 AM
Reposted by Alicia Oshlack
🚀 Just 2 days to go!
Excitement is building for #RECOMBseq 2025 in Seoul 🎉
Join leading researchers as we dive into cutting-edge computational genomics, from single-cell to long-read sequencing.
🗓 April 24-25
📍 Seoul
📄 Program: recomb-seq.github.io/program/
#RECOMB2025 #Genomics #Bioinformatics
Excitement is building for #RECOMBseq 2025 in Seoul 🎉
Join leading researchers as we dive into cutting-edge computational genomics, from single-cell to long-read sequencing.
🗓 April 24-25
📍 Seoul
📄 Program: recomb-seq.github.io/program/
#RECOMB2025 #Genomics #Bioinformatics
Program
RECOMB-seq is the RECOMB Satellite Conference on Biological Sequence Analysis
recomb-seq.github.io
April 22, 2025 at 11:57 AM
🚀 Just 2 days to go!
Excitement is building for #RECOMBseq 2025 in Seoul 🎉
Join leading researchers as we dive into cutting-edge computational genomics, from single-cell to long-read sequencing.
🗓 April 24-25
📍 Seoul
📄 Program: recomb-seq.github.io/program/
#RECOMB2025 #Genomics #Bioinformatics
Excitement is building for #RECOMBseq 2025 in Seoul 🎉
Join leading researchers as we dive into cutting-edge computational genomics, from single-cell to long-read sequencing.
🗓 April 24-25
📍 Seoul
📄 Program: recomb-seq.github.io/program/
#RECOMB2025 #Genomics #Bioinformatics
On my way to #RECOMBseq, my first international conference since 2019! @recombseq.bsky.social
April 22, 2025 at 10:26 PM
On my way to #RECOMBseq, my first international conference since 2019! @recombseq.bsky.social
Reposted by Alicia Oshlack
Just 9 days to go! #RECOMBseq hits Seoul on April 24 🧬🇰🇷
Join us for two days of cutting-edge high-throughput sequencing algorithms, global scientific minds, and vibrant city vibes.
📄 Check out the full program here: recomb-seq.github.io/program/
#RECOMB2025 #Genomics #Bioinformatics
Join us for two days of cutting-edge high-throughput sequencing algorithms, global scientific minds, and vibrant city vibes.
📄 Check out the full program here: recomb-seq.github.io/program/
#RECOMB2025 #Genomics #Bioinformatics
Program
RECOMB-seq is the RECOMB Satellite Conference on Biological Sequence Analysis
recomb-seq.github.io
April 15, 2025 at 7:12 PM
Just 9 days to go! #RECOMBseq hits Seoul on April 24 🧬🇰🇷
Join us for two days of cutting-edge high-throughput sequencing algorithms, global scientific minds, and vibrant city vibes.
📄 Check out the full program here: recomb-seq.github.io/program/
#RECOMB2025 #Genomics #Bioinformatics
Join us for two days of cutting-edge high-throughput sequencing algorithms, global scientific minds, and vibrant city vibes.
📄 Check out the full program here: recomb-seq.github.io/program/
#RECOMB2025 #Genomics #Bioinformatics
Reposted by Alicia Oshlack
Hey #genomics, #bioinformatics & #algorithms peeps 💻🧬. If you haven't seen the CfP for WABI '25 yet, check out the website wabiconf.github.io/2025/. It will be held at UMD @umdscience.bsky.social with Broňa Brejová & myself as co-chairs! Submit your exciting & late-breaking algorithmic work to WABI
WABI 2025
WABI Conference on Algorithms in Bioinformatics
wabiconf.github.io
April 5, 2025 at 9:05 PM
Hey #genomics, #bioinformatics & #algorithms peeps 💻🧬. If you haven't seen the CfP for WABI '25 yet, check out the website wabiconf.github.io/2025/. It will be held at UMD @umdscience.bsky.social with Broňa Brejová & myself as co-chairs! Submit your exciting & late-breaking algorithmic work to WABI
Reposted by Alicia Oshlack
📣 ABSTRACTS 📣
Submit your abstract for OZ Single Cell in Sydney by April 11 docs.google.com/forms/d/1jDv...
Submit your abstract for OZ Single Cell in Sydney by April 11 docs.google.com/forms/d/1jDv...
March 25, 2025 at 1:12 AM
📣 ABSTRACTS 📣
Submit your abstract for OZ Single Cell in Sydney by April 11 docs.google.com/forms/d/1jDv...
Submit your abstract for OZ Single Cell in Sydney by April 11 docs.google.com/forms/d/1jDv...
Reposted by Alicia Oshlack
A group leader position is open at Peter Mac in Melbourne, Australia!
Join us! Applications until May 5.
👇👇
www.nature.com/naturecareer...
Join us! Applications until May 5.
👇👇
www.nature.com/naturecareer...
Group Leader - Melbourne (Suburb), Greater Melbourne (Inner) (AU) job with Peter MacCallum Cancer Centre | 12837590
Peter Mac is recruiting a Group Leader to increase the capacity and efficiency of our “discovery to translation” cancer research pipeline.
www.nature.com
March 21, 2025 at 9:13 PM
A group leader position is open at Peter Mac in Melbourne, Australia!
Join us! Applications until May 5.
👇👇
www.nature.com/naturecareer...
Join us! Applications until May 5.
👇👇
www.nature.com/naturecareer...
Start a group with us in Melbourne at PeterMac! www.nature.com/naturecareer...
Group Leader - Melbourne (Suburb), Greater Melbourne (Inner) (AU) job with Peter MacCallum Cancer Centre | 12837590
Peter Mac is recruiting a Group Leader to increase the capacity and efficiency of our “discovery to translation” cancer research pipeline.
www.nature.com
March 22, 2025 at 8:04 AM
Start a group with us in Melbourne at PeterMac! www.nature.com/naturecareer...
What a great lineup! #ozsinglecell25
Early bird registrations are open! Submit your abstract for #ozsinglecell25
Ozsinglecell.com
21-23 May, Sydney
Ozsinglecell.com
21-23 May, Sydney
March 19, 2025 at 8:24 PM
What a great lineup! #ozsinglecell25
Reposted by Alicia Oshlack
Delighted to see this published. Congratulations Ying Chen and @jonathangoeke.bsky.social
An Analysis presents benchmarking results from the Singapore Nanopore Expression consortium project, plus a valuable resource of datasets generated from various long-read and short-read RNA sequencing technologies.
@jonathangoeke.bsky.social @astar-gis.bsky.social
www.nature.com/articles/s41...
@jonathangoeke.bsky.social @astar-gis.bsky.social
www.nature.com/articles/s41...
March 14, 2025 at 12:00 AM
Delighted to see this published. Congratulations Ying Chen and @jonathangoeke.bsky.social